Miyakogusa Predicted Gene

Lj1g3v1487390.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K1U1_SOYBN 927 80.0 87.7 (tr|I1K1U1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G58030.1 758 65.3 78.5 | Symbols: CAT2 | cationic amino acid transporter 2 | chr1:21464185-21468141 REVERSE LENGTH=635
Medicago Medtr6g027660.1 838 73.3 82.1 | cationic amino acid transporter 2, vacuolar protein | HC | chr6:9642574-9637500 | 20130731
Soybean Glyma05g11410.1 927 80.0 87.7  
LJGI gnl|LJGI|TC82799 1800 99.6 99.6 similar to UniRef100_A7QRK1 Cluster: Chromosome chr8 scaffold_150, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_150, whole genome shotgun sequence - Vitis vinifera (Grape), partial (50%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1487390.1 length: 586 aa.
IPR002293 Amino acid/polyamine transporter I
method AccNumber shortName E-value location
Biological Process GO:0003333 amino acid transmembrane transport    
Molecular Function GO:0015171 amino acid transmembrane transporter activity    
Cellular Component GO:0016020 membrane    
HMMPIR PIRSF006060 Amino 2.8e-62 1-575
HMMPanther PTHR11785 AMINO 4.8e-204 1-564
IPR015606 Cationic amino acid transporter
HMMPanther PTHR11785:SF53 CATIONIC 4.8e-204 1-564
no_ID  
HMMPfam PF13520 AA_permease_2 8.1e-52 2-376
HMMPfam PF13906 AA_permease_C 1.6e-21 511-561
Seg seg seg NA 4-21
521-534
Putative transmembrane regions
  From To
TM segments
SOSUI		 1 23
27 49
65 87
120 142
150 171
193 215
231 253
275 297
325 347
351 373
446 468
475 496
509 531
538 560
Wolf-PSORT
Lj1g3v1487390.1	vacu 6, plas 5, extr 1, E.R. 1, golg 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1487390.1