Miyakogusa Predicted Gene

Lj1g3v1453970.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KBY3_SOYBN 922 85.3 87.5 (tr|I1KBY3) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT5G50920.1 801 77.9 82.7 | Symbols: CLPC, ATHSP93-V, HSP93-V, DCA1, CLPC1 | CLPC homologue 1 | chr5:20715710-20719800 REVERSE LENGTH=929
Medicago Medtr3g498725.2 898 83.1 85.8 | ATP-dependent Clp protease ATP-binding subunit | HC | chr3:45109477-45116986 | 20130731
Soybean Glyma06g17360.1 922 85.3 87.5  
LJGI gnl|LJGI|TC68560 1148 100.0 100.0 similar to UniRef100_P35100 Cluster: ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplast precursor; n=1; Pisum sativum|Rep: ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplast precursor - Pisum sativum (Garden pea), partial (21%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1453970.1 length: 544 aa.
IPR001943 UVR domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF02151 UVR 2.3e-06 510-544
ProfileScan PS50151 UVR 10.720 509-544
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 4.2e-13 292-432
IPR003959 ATPase, AAA-type, core
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00004 AAA 5.7e-15 297-413
IPR004176 Clp, N-terminal
Biological Process GO:0019538 protein metabolic process    
HMMPfam PF02861 Clp_N 1.5e-19 106-158
182-233
IPR018368 Chaperonin ClpA/B, conserved site
Molecular Function GO:0005524 ATP binding    
PatternScan PS00870 CLPAB_1 NA 387-399
IPR023150 Double Clp-N motif
Gene3D G3DSA:1.10.1780.10 no description 5.3e-50 91-235
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 2.3e-80 252-529
no_ID  
Coil coil coiled-coil NA 346-367
Gene3D G3DSA:1.10.8.60 no description 3.9e-32 436-520
Gene3D G3DSA:3.40.50.300 no description 1.2e-49 253-435
HMMPanther PTHR11638 ATP-DEPENDENT 1.8e-288 80-544
HMMPanther PTHR11638:SF19 ATP-DEPENDENT 1.8e-288 80-544
Seg seg seg NA 119-134
196-208
238-249
377-391
superfamily SSF81923 Double 6e-34 93-238
Wolf-PSORT
Lj1g3v1453970.1	mito 8, chlo 6
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1453970.1