Miyakogusa Predicted Gene
- Lj1g3v1442490.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7IBZ6_MEDTR |
234 |
72.3 |
82.7 |
(tr|G7IBZ6) 17.6 kDa class I heat shock protein OS=Medicago truncatula GN=MTR_1g098690 PE=3 SV=1 |
| TAIR_pep |
AT1G76770.1 |
96.7 |
52.1 |
72.9 |
| Symbols: | HSP20-like chaperones superfamily protein | chr1:28813569-28814378 FORWARD LENGTH=244 |
| Medicago |
Medtr1g098690.1 |
234 |
72.3 |
82.7 |
| hsp20/alpha crystallin family protein | HC | chr1:44452807-44453935 | 20130731 |
| Soybean |
Glyma20g30710.1 |
198 |
64.3 |
73.2 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v1442490.1 |
length: 170 aa. |
| IPR002068 |
Alpha crystallin/Hsp20 domain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF00011 |
HSP20 |
2.9e-10 |
2-88 |
| ProfileScan |
PS01031 |
HSP20 |
14.250 |
1-84 |
| IPR008978 |
HSP20-like chaperone |
| superfamily |
SSF49764 |
HSP20-like |
1.2e-08 |
2-89 |
| no_ID |
|
| Gene3D |
G3DSA:2.60.40.790 |
no description |
9.9e-10 |
2-89 |
| Seg |
seg |
seg |
NA |
97-105 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
144 |
166 |
- Wolf-PSORT
Lj1g3v1442490.1 cyto 12, chlo 1, E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v1442490.1 |
|