Miyakogusa Predicted Gene
- Lj1g3v1442480.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1NH25_SOYBN |
493 |
81.4 |
88.4 |
(tr|I1NH25) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT1G74450.1 |
396 |
65.2 |
81.0 |
| Symbols: | Protein of unknown function (DUF793) | chr1:27982737-27983930 FORWARD LENGTH=397 |
| Medicago |
Medtr1g098700.1 |
467 |
76.0 |
85.5 |
| plant/F1M20-13 protein | HC | chr1:44461090-44459084 | 20130731 |
| Soybean |
Glyma20g30700.1 |
493 |
81.4 |
88.4 |
|
| LJGI |
gnl|LJGI|TC70871 |
660 |
99.4 |
99.4 |
similar to UniRef100_A7Q7B0 Cluster: Chromosome chr18 scaffold_59, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_59, whole genome shotgun sequence - Vitis vinifera (Grape), partial (28%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v1442480.1 |
length: 296 aa. |
| IPR008511 |
Protein BYPASS-related |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF05633 |
DUF793 |
1.8e-134 |
1-289 |
| no_ID |
|
| HMMPanther |
PTHR31509 |
FAMILY |
1.3e-95 |
1-296 |
| HMMPanther |
PTHR31509:SF0 |
SUBFAMILY |
1.3e-95 |
1-296 |
| Seg |
seg |
seg |
NA |
89-102 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
143 |
165 |
- Wolf-PSORT
Lj1g3v1442480.1 chlo 3, E.R. 3, cyto 2, plas 2, extr 2, chlo_mito 2, E.R._vacu 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v1442480.1 |
|