Miyakogusa Predicted Gene
- Lj1g3v1409270.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3T1X5_MEDTR |
279 |
76.1 |
86.1 |
(tr|I3T1X5) Uncharacterized protein OS=Medicago truncatula PE=2 SV=1 |
| TAIR_pep |
AT1G01630.1 |
176 |
54.6 |
69.7 |
| Symbols: | Sec14p-like phosphatidylinositol transfer family protein | chr1:229206-230675 FORWARD LENGTH=255 |
| Medicago |
Medtr3g098530.1 |
278 |
76.1 |
86.7 |
| polyphosphoinositide-binding protein | HC | chr3:44987322-44989682 | 20130731 |
| Soybean |
Glyma06g17160.3 |
276 |
77.0 |
85.6 |
|
| LJGI |
gnl|LJGI|TC75085 |
1035 |
100.0 |
100.0 |
similar to UniRef100_O48940 Cluster: Polyphosphoinositide binding protein Ssh2p; n=1; Glycine max|Rep: Polyphosphoinositide binding protein Ssh2p - Glycine max (Soybean), partial (94%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v1409270.1 |
length: 174 aa. |
| IPR001251 |
CRAL-TRIO domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:3.40.525.10 |
no description |
1.9e-12 |
88-174 |
| HMMPfam |
PF00650 |
CRAL_TRIO |
2.8e-05 |
111-174 |
| superfamily |
SSF52087 |
CRAL/TRIO |
4e-10 |
103-174 |
| IPR011074 |
CRAL/TRIO, N-terminal domain |
| HMMPfam |
PF03765 |
CRAL_TRIO_N |
8.2e-07 |
53-86 |
| HMMSmart |
SM01100 |
CRAL/TRIO, |
6.4e-05 |
61-86 |
| superfamily |
SSF46938 |
CRAL/TRIO |
8.6e-15 |
28-102 |
| no_ID |
|
| Gene3D |
G3DSA:1.10.8.20 |
no description |
5.1e-14 |
15-87 |
| HMMPanther |
PTHR10174 |
RETINALDEHYDE |
6.5e-42 |
32-174 |
| HMMPanther |
PTHR10174:SF78 |
SEC14 |
6.5e-42 |
32-174 |
- Wolf-PSORT
Lj1g3v1409270.1 nucl_plas 5, nucl 4.5, plas 4.5, chlo 3, cyto 1, extr 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v1409270.1 |
|