Miyakogusa Predicted Gene
- Lj1g3v1388180.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SDK0_LOTJA |
526 |
98.8 |
99.2 |
(tr|I3SDK0) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT5G51020.1 |
437 |
79.7 |
88.7 |
| Symbols: CRL | crumpled leaf | chr5:20745560-20747165 REVERSE LENGTH=269 |
| Medicago |
Medtr3g098510.1 |
467 |
89.8 |
94.5 |
| chromophore lyase CpcT/CpeT | HC | chr3:44977717-44982368 | 20130731 |
| Soybean |
Glyma04g37950.1 |
514 |
93.4 |
98.0 |
|
| LJGI |
gnl|LJGI|TC74930 |
1570 |
99.8 |
99.8 |
similar to UniRef100_Q2R3F0 Cluster: Expressed protein; n=1; Oryza sativa Japonica Group|Rep: Expressed protein - Oryza sativa subsp. japonica (Rice), partial (84%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v1388180.1 |
length: 265 aa. |
| IPR010404 |
Chromophore lyase CpcT/CpeT |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0017009 |
protein-phycocyanobilin linkage |
|
|
| HAMAP |
MF_01460 |
Chrphore_lyase_CpxT |
18.747 |
41-237 |
| HMMPfam |
PF06206 |
CpeT |
1.1e-45 |
49-231 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
2-9 |
- Wolf-PSORT
Lj1g3v1388180.1 nucl 8, cyto 2, mito 2, plas 1, E.R. 1, chlo_mito 1, cyto_mito 1, cyto_pero 1, E.R._plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v1388180.1 |
|