Miyakogusa Predicted Gene

Lj1g3v1387070.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1KP16_SOYBN 821 82.1 90.6 (tr|I1KP16) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT5G51050.1 710 73.5 82.2 | Symbols: | Mitochondrial substrate carrier family protein | chr5:20753381-20755714 FORWARD LENGTH=487
Medicago Medtr8g096050.1 822 82.1 90.8 | substrate carrier family protein | HC | chr8:40066038-40061537 | 20130731
Soybean Glyma08g00960.1 821 82.1 90.6  
LJGI gnl|LJGI|TC64872 353 83.8 83.8 similar to UniRef100_A7PA49 Cluster: Chromosome chr14 scaffold_9, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_9, whole genome shotgun sequence - Vitis vinifera (Grape), partial (36%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1387070.1 length: 480 aa.
IPR002048 EF-hand domain
method AccNumber shortName E-value location
Molecular Function GO:0005509 calcium ion binding    
HMMPfam PF13405 EF_hand_4 0.0011 67-92
HMMSmart SM00054 EF-hand, 1.2 66-94
97-125
133-161
ProfileScan PS50222 EF_HAND_2 12.979 26-61
62-97
98-128
129-164
IPR002067 Mitochondrial carrier protein
Biological Process GO:0055085 transmembrane transport    
FPrintScan PR00926 MITOCARRIER 3.3e-28 201-214
214-228
254-274
305-323
350-368
397-419
IPR011992 EF-hand-like domain
Molecular Function GO:0005509 calcium ion binding    
Gene3D G3DSA:1.10.238.10 no description 1.6e-28 28-165
HMMPfam PF13499 EF_hand_5 3.1e-09 98-157
IPR018108 Mitochondrial substrate/solute carrier
HMMPfam PF00153 Mito_carr 6.6e-27 200-282
291-378
388-478
ProfileScan PS50920 SOLCAR 25.838 196-279
290-377
388-476
IPR018247 EF-Hand 1, calcium-binding site
PatternScan PS00018 EF_HAND_1 NA 75-87
142-154
IPR023395 Mitochondrial carrier domain
Gene3D G3DSA:1.50.40.10 no description 4.8e-92 196-475
superfamily SSF103506 Mitochondrial 2.1e-76 193-473
no_ID  
HMMPanther PTHR24089 FAMILY 1.4e-146 180-480
HMMPanther PTHR24089:SF57 SUBFAMILY 1.4e-146 180-480
Seg seg seg NA 294-310
superfamily SSF47473 EF-hand 1.8e-38 10-201
Wolf-PSORT
Lj1g3v1387070.1	cysk 12, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1387070.1