Miyakogusa Predicted Gene

Lj1g3v1387020.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KBV2_SOYBN 1823 89.1 94.7 (tr|I1KBV2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G07350.2 1446 72.5 84.8 | Symbols: Tudor1, AtTudor1, TSN1 | TUDOR-SN protein 1 | chr5:2320021-2324892 REVERSE LENGTH=1007
Medicago Medtr3g098420.1 1724 84.8 92.4 | 110 kDa 4SNc-tudor domain protein | HC | chr3:44929790-44936677 | 20130731
Soybean Glyma06g17050.4 1823 89.1 94.7  
LJGI gnl|LJGI|TC71147 1633 94.7 94.7 similar to UniRef100_Q8L5C2 Cluster: 110 kDa 4SNc-Tudor domain protein; n=3; Pisum sativum|Rep: 110 kDa 4SNc-Tudor domain protein - Pisum sativum (Garden pea), partial (35%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1387020.1 length: 990 aa.
IPR002999 Tudor domain
method AccNumber shortName E-value location
HMMPfam PF00567 TUDOR 3.9e-29 730-855
HMMSmart SM00333 Tudor 1.9e-07 779-843
ProfileScan PS50304 TUDOR 16.386 780-845
IPR006021 Staphylococcal nuclease (SNase-like)
Molecular Function GO:0003676 nucleic acid binding    
Gene3D G3DSA:2.40.50.90 no description 7.7e-21 19-151
270-369
387-569
581-714
836-978
HMMPfam PF00565 SNase 1.6e-08 43-151
267-363
616-714
860-967
HMMSmart SM00318 Staphylococcal 1e-29 10-151
186-364
378-557
587-714
ProfileScan PS50830 TNASE_3 17.114 10-151
186-364
378-557
587-714
854-968
IPR016071 Staphylococcal nuclease (SNase-like), OB-fold
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0016788 hydrolase activity, acting on ester bonds    
superfamily SSF50199 Staphylococcal 1.2e-17 580-714
3-151
179-370
371-561
789-975
IPR016685 RNA-induced silencing complex, nuclease component Tudor-SN
Cellular Component GO:0016442 RNA-induced silencing complex    
Biological Process GO:0031047 gene silencing by RNA    
HMMPIR PIRSF017179 RNA-induced 0 1-980
no_ID  
Coil coil coiled-coil NA 340-361
Gene3D G3DSA:2.30.30.140 no description 8.3e-18 757-835
HMMPanther PTHR12302 EBNA2 2.6e-278 1-986
HMMPanther PTHR12302:SF0 SUBFAMILY 2.6e-278 1-986
Seg seg seg NA 979-990
superfamily SSF63748 Tudor/PWWP/MBT 3.2e-19 754-858
Wolf-PSORT
Lj1g3v1387020.1	chlo 11, cyto 1, mito 1, extr 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1387020.1