Miyakogusa Predicted Gene

Lj1g3v1386650.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7J2R2_MEDTR 1375 88.8 93.7 (tr|G7J2R2) Respiratory burst oxidase-like protein OS=Medicago truncatula GN=MTR_3g098380 PE=4 SV=1
TAIR_pep AT5G47910.1 1066 69.1 79.9 | Symbols: RBOHD, ATRBOHD | respiratory burst oxidase homologue D | chr5:19397585-19401768 FORWARD LENGTH=921
Medicago Medtr3g098380.1 1375 88.8 93.7 | respiratory burst oxidase-like protein D | HC | chr3:44912505-44919130 | 20130731
Soybean Glyma04g38040.1 1317 88.6 91.9  
LJGI gnl|LJGI|TC82517 1863 99.0 99.0 similar to UniRef100_Q5ENY4 Cluster: Respiratory burst oxidase 1; n=1; Medicago truncatula|Rep: Respiratory burst oxidase 1 - Medicago truncatula (Barrel medic), partial (35%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1386650.1 length: 743 aa.
IPR000778 Cytochrome b245, heavy chain
method AccNumber shortName E-value location
Cellular Component GO:0016020 membrane    
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
FPrintScan PR00466 GP91PHOX 2.6e-19 265-283
357-377
524-537
547-564
IPR002048 EF-hand domain
Molecular Function GO:0005509 calcium ion binding    
HMMPfam PF13405 EF_hand_4 0.00023 61-86
ProfileScan PS50222 EF_HAND_2 8.404 57-92
101-136
IPR011992 EF-hand-like domain
Molecular Function GO:0005509 calcium ion binding    
Gene3D G3DSA:1.10.238.10 no description 8.9e-11 8-130
IPR013112 FAD-binding 8
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF08022 FAD_binding_8 2.3e-31 418-535
IPR013121 Ferric reductase, NAD binding
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF08030 NAD_binding_6 7.9e-50 542-725
IPR013130 Ferric reductase transmembrane component-like domain
HMMPfam PF01794 Ferric_reduct 5.8e-17 219-375
IPR013623 NADPH oxidase Respiratory burst
Molecular Function GO:0004601 peroxidase activity    
Molecular Function GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF08414 NADPH_Ox 2.9e-14 14-60
IPR017927 Ferredoxin reductase-type FAD-binding domain
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
ProfileScan PS51384 FAD_FR 13.758 414-538
IPR017938 Riboflavin synthase-like beta-barrel
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
superfamily SSF63380 Riboflavin 1.4e-16 415-537
IPR018247 EF-Hand 1, calcium-binding site
PatternScan PS00018 EF_HAND_1 NA 70-82
no_ID  
Gene3D G3DSA:2.40.30.10 no description 2e-11 418-493
Gene3D G3DSA:3.40.50.80 no description 1.1e-11 603-731
HMMPanther PTHR11972 NADPH 0 14-743
HMMPanther PTHR11972:SF5 RESPIRATORY 0 14-743
Seg seg seg NA 264-278
superfamily SSF47473 EF-hand 1.1e-14 14-134
superfamily SSF52343 Ferredoxin 4.8e-13 538-743
Putative transmembrane regions
  From To
TM segments
SOSUI		 180 201
222 244
317 339
362 384
392 413
Wolf-PSORT
Lj1g3v1386650.1	cyto 7, E.R. 3, nucl 2, E.R._vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1386650.1