Miyakogusa Predicted Gene

Lj1g3v1386470.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KBU3_SOYBN 855 74.6 82.1 (tr|I1KBU3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G21065.1 431 39.3 59.6 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:11245976-11247763 FORWARD LENGTH=595
Medicago Medtr3g098280.1 836 72.3 80.6 | pentatricopeptide (PPR) repeat protein | HC | chr3:44861451-44859606 | 20130731
Soybean Glyma06g16980.1 855 74.6 82.1  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1386470.1 length: 562 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.021 124-150
153-178
229-255
329-353
HMMPfam PF13041 PPR_2 3.6e-09 255-301
HMMTigr TIGR00756 PPR: 0.00092 122-150
153-178
229-256
257-290
293-325
ProfileScan PS51375 PPR 5.448 53-86
119-153
154-184
255-289
224-254
189-223
290-320
326-356
358-388
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 0.00022 333-398
no_ID  
HMMPanther PTHR24015 FAMILY 8.1e-225 1-562
HMMPanther PTHR24015:SF61 PGR3 8.1e-225 1-562
HMMPfam PF14432 DYW_deaminase 2.2e-16 440-552
Seg seg seg NA 95-114
404-414
Putative transmembrane regions
  From To
TM segments
SOSUI		 116 138
190 212
Wolf-PSORT
Lj1g3v1386470.1	chlo 11, mito 1, plas 1, extr 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1386470.1