Miyakogusa Predicted Gene

Lj1g3v1386420.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KBU0_SOYBN 1500 81.6 89.7 (tr|I1KBU0) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT5G08490.1 1007 56.0 74.3 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:2745208-2747757 REVERSE LENGTH=849
Medicago Medtr3g098230.1 1505 81.1 89.7 | PPR containing plant-like protein | HC | chr3:44828973-44831769 | 20130731
Soybean Glyma06g16950.1 1417 81.9 89.8  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1386420.1 length: 873 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.00028 8-30
289-314
319-343
394-419
422-452
498-523
527-555
559-587
HMMPfam PF13041 PPR_2 5.4e-11 211-255
655-703
HMMPfam PF13812 PPR_3 0.041 110-142
HMMTigr TIGR00756 PPR: 0.0014 110-142
214-247
319-344
422-456
527-556
559-592
658-691
693-726
ProfileScan PS51375 PPR 6.906 5-39
108-143
77-107
145-179
212-246
180-211
317-351
286-316
420-454
389-419
353-387
556-590
525-555
493-523
455-489
656-690
625-655
691-726
727-757
793-827
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 6.9e-07 500-584
no_ID  
HMMPanther PTHR24015 FAMILY 6.1e-290 200-872
HMMPanther PTHR24015:SF147SUBFAMILY NOT 6.1e-290 200-872
Seg seg seg NA 435-450
Wolf-PSORT
Lj1g3v1386420.1	chlo 9, nucl 2, mito 1, vacu 1, E.R. 1, cyto_nucl 1, cysk_nucl 1, nucl_plas 1, E.R._vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1386420.1