Miyakogusa Predicted Gene

Lj1g3v1386410.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7J2P6_MEDTR 957 84.6 90.1 (tr|G7J2P6) Cleft lip and palate transmembrane protein-like protein OS=Medicago truncatula GN=MTR_3g098210 PE=4 SV=1
TAIR_pep AT5G08500.1 837 74.1 83.3 | Symbols: | Transmembrane CLPTM1 family protein | chr5:2748261-2751590 FORWARD LENGTH=590
Medicago Medtr3g098210.1 957 84.6 90.1 | cleft lip and palate transmembrane protein | HC | chr3:44821299-44813725 | 20130731
Soybean Glyma04g38120.1 944 84.8 88.8  
LJGI gnl|LJGI|TC62686 3402 99.0 99.0  
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1386410.1 length: 589 aa.
IPR008429 Cleft lip and palate transmembrane 1
method AccNumber shortName E-value location
HMMPanther PTHR21347 CLEFT 2e-269 15-589
HMMPfam PF05602 CLPTM1 4.4e-154 31-462
no_ID  
Seg seg seg NA 2-30
165-179
266-279
576-588
Putative transmembrane regions
  From To
TM segments
SOSUI		 27 49
359 381
385 407
440 461
470 492
Wolf-PSORT
Lj1g3v1386410.1	plas 11, golg 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1386410.1