Miyakogusa Predicted Gene
- Lj1g3v1386400.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SFW7_LOTJA |
309 |
100.0 |
100.0 |
(tr|I3SFW7) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT1G04290.1 |
198 |
69.5 |
79.5 |
| Symbols: | Thioesterase superfamily protein | chr1:1147721-1148352 REVERSE LENGTH=155 |
| Medicago |
Medtr3g098100.1 |
238 |
76.1 |
85.2 |
| acyl-CoA thioesterase, putative | HC | chr3:44772703-44770803 | 20130731 |
| Soybean |
Glyma04g38140.2 |
259 |
81.8 |
92.2 |
|
| LJGI |
gnl|LJGI|TC61185 |
922 |
100.0 |
100.0 |
similar to UniRef100_A7QR31 Cluster: Chromosome undetermined scaffold_147, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_147, whole genome shotgun sequence - Vitis vinifera (Grape), partial (71%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v1386400.1 |
length: 154 aa. |
| IPR003736 |
Phenylacetic acid degradation-related domain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMTigr |
TIGR00369 |
unchar_dom_1: |
7.7e-15 |
42-146 |
| IPR006683 |
Thioesterase superfamily |
| HMMPfam |
PF03061 |
4HBT |
6.2e-15 |
61-137 |
| no_ID |
|
| Gene3D |
G3DSA:3.10.129.10 |
no description |
4.8e-36 |
35-149 |
| HMMPanther |
PTHR21660 |
THIOESTERASE |
9.6e-40 |
31-149 |
| superfamily |
SSF54637 |
Thioesterase/thiol |
3e-24 |
20-149 |
- Wolf-PSORT
Lj1g3v1386400.1 pero 5, cyto 4, mito 3, chlo 2, cyto_nucl 2, cyto_E.R. 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v1386400.1 |
|