Miyakogusa Predicted Gene

Lj1g3v1385260.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1JXU5_SOYBN 1356 75.7 82.9 (tr|I1JXU5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G17270.1 921 52.2 66.6 | Symbols: | Protein prenylyltransferase superfamily protein | chr5:5679995-5685597 FORWARD LENGTH=899
Medicago Medtr3g098060.1 1419 76.4 83.5 | protein prenylyltransferase superfamily protein | HC | chr3:44748129-44736017 | 20130731
Soybean Glyma04g38160.1 1356 75.7 82.9  
LJGI gnl|LJGI|AV776326 714 97.0 97.0 similar to UniRef100_A7QR33 Cluster: Chromosome undetermined scaffold_147, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_147, whole genome shotgun sequence - Vitis vinifera (Grape), partial (7%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1385260.1 length: 920 aa.
IPR011990 Tetratricopeptide-like helical
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 4.2e-34 504-723
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 23.173 589-724
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 0.0081 527-560
589-622
623-656
657-690
ProfileScan PS50005 TPR 5.458 527-560
623-656
657-690
691-724
no_ID  
HMMPanther PTHR16193 UNCHARACTERIZED 4.4e-222 1-910
HMMPfam PF13414 TPR_11 5.3e-11 626-685
Seg seg seg NA 25-42
584-599
844-855
superfamily SSF48452 TPR-like 6.9e-06 573-712
498-582
Wolf-PSORT
Lj1g3v1385260.1	nucl 4, cyto 3, E.R. 3, cyto_E.R. 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1385260.1