Miyakogusa Predicted Gene

Lj1g3v1385240.2

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1JXU6_SOYBN 424 68.2 79.4 (tr|I1JXU6) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT5G23610.2 214 47.1 66.8 | Symbols: | INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: SWITCH1 (TAIR:AT5G51330.1); Has 173 Blast hits to 168 proteins in 34 species: Archae - 3; Bacteria - 10; Metazoa - 6; Fungi - 2; Plants - 115; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). | chr5:7957641-7959968 REVERSE LENGTH=500

Medicago Medtr3g097570.1 379 60.3 70.4 | DYAD-like protein | HC | chr3:44730358-44733848 | 20130731

Soybean Glyma04g38170.2 424 68.2 79.4

LJGI gnl|LJGI|TC58629 1279 100.0 100.0 similar to UniRef100_A7QR34 Cluster: Chromosome undetermined scaffold_147, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_147, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj1g3v1385240.2 length: 307 aa.

no_ID

method AccNumber shortName E-value location

Coil coil coiled-coil NA 197-232

Seg seg seg NA 28-42

Wolf-PSORT

Lj1g3v1385240.2 nucl 8, chlo 3, mito 1, plas 1, pero 1, mito_plas 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v1385240.2

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1JXU6_SOYBN	424	68.2	79.4	(tr\|I1JXU6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT5G23610.2	214	47.1	66.8	\| Symbols: \| INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: SWITCH1 (TAIR:AT5G51330.1); Has 173 Blast hits to 168 proteins in 34 species: Archae - 3; Bacteria - 10; Metazoa - 6; Fungi - 2; Plants - 115; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). \| chr5:7957641-7959968 REVERSE LENGTH=500
Medicago	Medtr3g097570.1	379	60.3	70.4	\| DYAD-like protein \| HC \| chr3:44730358-44733848 \| 20130731
Soybean	Glyma04g38170.2	424	68.2	79.4
LJGI	gnl\|LJGI\|TC58629	1279	100.0	100.0	similar to UniRef100_A7QR34 Cluster: Chromosome undetermined scaffold_147, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome undetermined scaffold_147, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)

no_ID
Lj1g3v1385240.2				length: 307 aa.
method	AccNumber	shortName	E-value	location
Coil	coil	coiled-coil	NA	197-232
Seg	seg	seg	NA	28-42