Miyakogusa Predicted Gene

Lj1g3v1385230.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1KBT2_SOYBN 2089 85.5 90.3 (tr|I1KBT2) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT5G23630.1 1832 74.6 83.4 | Symbols: PDR2, MIA | phosphate deficiency response 2 | chr5:7960756-7967644 REVERSE LENGTH=1179
Medicago Medtr3g097560.1 2095 84.9 90.2 | cation-transporting ATPase, putative | HC | chr3:44714904-44728896 | 20130731
Soybean Glyma06g16860.1 2089 85.5 90.3  
LJGI gnl|LJGI|CB828658 1076 100.0 100.0 homologue to UniRef100_A7QR39 Cluster: Chromosome undetermined scaffold_147, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_147, whole genome shotgun sequence - Vitis vinifera (Grape), partial (16%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1385230.1 length: 1184 aa.
IPR001757 Cation-transporting P-type ATPase
method AccNumber shortName E-value location
Biological Process GO:0006812 cation transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0019829 cation-transporting ATPase activity    
FPrintScan PR00119 CATATPASE 3.1e-15 308-322
488-502
690-700
809-828
HMMPanther PTHR24093 FAMILY 0 51-1158
HMMTigr TIGR01494 ATPase_P-type: 4.4e-18 403-513
780-828
IPR006544 Cation-transporting P-type ATPase, subfamily V
Biological Process GO:0006812 cation transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0016887 ATPase activity    
HMMPanther PTHR24093:SF82 ATPASE, 0 51-1158
HMMTigr TIGR01657 P-ATPase-V: 0 45-1141
IPR008250 P-type ATPase, A domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0046872 metal ion binding    
Gene3D G3DSA:2.70.150.10 no description 4e-32 201-387
HMMPfam PF00122 E1-E2_ATPase 1.4e-20 235-473
IPR018303 P-type ATPase, phosphorylation site
PatternScan PS00154 ATPASE_E1_E2 NA 490-496
IPR023214 HAD-like domain
Gene3D G3DSA:3.40.50.1000 no description 1.2e-32 757-829
superfamily SSF56784 HAD-like 7.4e-28 483-833
IPR023299 P-type ATPase, cytoplasmic domain N
Gene3D G3DSA:3.40.1110.10 no description 4.9e-24 524-666
superfamily SSF81660 Metal 2e-22 494-680
no_ID  
Coil coil coiled-coil NA 889-910
HMMPfam PF12710 HAD 3.6e-20 487-820
PatternScan PS01229 COF_2 NA 809-831
Seg seg seg NA 6-20
403-416
833-863
superfamily SSF81653 Calcium 1.2e-18 253-387
superfamily SSF81665 Calcium 1.6e-41 167-1162
Putative transmembrane regions
  From To
TM segments
SOSUI
28 50
52 74
195 217
219 238
402 424
434 456
952 974
982 1004
1018 1040
1063 1085
1098 1120
1137 1159
Wolf-PSORT
Lj1g3v1385230.1	cyto 4, plas 4, E.R. 4, E.R._plas 4, cyto_E.R. 4, cyto_plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1385230.1