Miyakogusa Predicted Gene

Lj1g3v1374570.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JGF3_SOYBN 1099 63.6 76.2 (tr|I1JGF3) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT5G06400.1 702 43.0 62.0 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Medicago Medtr1g055295.1 1106 64.9 76.0 | PPR containing plant-like protein | HC | chr1:24439721-24443062 | 20130731
Soybean Glyma02g34900.1 1030 61.7 74.2  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1374570.1 length: 804 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.44 141-169
213-239
634-654
670-699
775-794
HMMPfam PF12854 PPR_1 8e-06 247-271
HMMPfam PF13041 PPR_2 4e-12 283-323
346-395
703-748
HMMPfam PF13812 PPR_3 0.56 82-108
175-207
568-596
HMMTigr TIGR00756 PPR: 0.00031 83-113
141-174
248-274
281-313
315-348
351-382
385-414
575-597
634-657
670-702
705-738
739-772
ProfileScan PS51375 PPR 8.364 80-114
138-172
173-207
277-311
243-273
208-242
312-346
347-381
382-416
560-596
631-665
667-701
702-736
737-771
772-804
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 5.6e-06 627-731
no_ID  
HMMPanther PTHR24015 FAMILY 2e-104 33-794
HMMPanther PTHR24015:SF0 SUBFAMILY 2e-104 33-794
superfamily SSF48452 TPR-like 0.00025 277-591
Wolf-PSORT
Lj1g3v1374570.1	chlo 5, nucl 3, cyto 3, cyto_nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1374570.1