Miyakogusa Predicted Gene
- Lj1g3v1358990.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G8A1P0_MEDTR |
714 |
75.3 |
83.0 |
(tr|G8A1P0) Amino acid permease OS=Medicago truncatula GN=MTR_122s0063 PE=4 SV=1 |
| TAIR_pep |
AT5G09220.1 |
629 |
63.0 |
79.2 |
| Symbols: AAP2 | amino acid permease 2 | chr5:2866867-2868863 FORWARD LENGTH=493 |
| Medicago |
Medtr3g096830.1 |
714 |
75.3 |
83.0 |
| transmembrane amino acid transporter family protein | HC | chr3:44319007-44314187 | 20130731 |
| Soybean |
Glyma06g16340.1 |
693 |
71.3 |
81.5 |
|
| LJGI |
gnl|LJGI|TC63583 |
2056 |
99.2 |
99.2 |
similar to UniRef100_Q93X15 Cluster: Amino acid permease AAP1; n=1; Vicia faba var. minor|Rep: Amino acid permease AAP1 - Vicia faba var. minor, partial (72%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v1358990.1 |
length: 470 aa. |
| IPR013057 |
Amino acid transporter, transmembrane |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF01490 |
Aa_trans |
1.6e-107 |
27-456 |
| no_ID |
|
| HMMPanther |
PTHR22950 |
AMINO |
1.6e-130 |
19-470 |
| HMMPanther |
PTHR22950:SF9 |
SUBFAMILY |
1.6e-130 |
19-470 |
| Seg |
seg |
seg |
NA |
436-458 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
31 |
53 |
| 57 |
79 |
| 115 |
137 |
| 161 |
179 |
| 185 |
206 |
| 271 |
293 |
| 318 |
340 |
| 387 |
409 |
| 439 |
460 |
- Wolf-PSORT
Lj1g3v1358990.1 plas 6, vacu 4, golg 3, nucl_plas 3, cysk_plas 3, mito_plas 3, cyto_plas 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v1358990.1 |
|