Miyakogusa Predicted Gene
- Lj1g3v1357950.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G8A1P0_MEDTR |
288 |
70.4 |
79.4 |
(tr|G8A1P0) Amino acid permease OS=Medicago truncatula GN=MTR_122s0063 PE=4 SV=1 |
| TAIR_pep |
AT1G77380.1 |
261 |
60.5 |
73.2 |
| Symbols: AAP3, ATAAP3 | amino acid permease 3 | chr1:29075201-29077252 REVERSE LENGTH=476 |
| Medicago |
Medtr3g096830.1 |
288 |
70.4 |
79.4 |
| transmembrane amino acid transporter family protein | HC | chr3:44319007-44314187 | 20130731 |
| Soybean |
Glyma08g00460.1 |
282 |
66.3 |
77.2 |
|
| LJGI |
gnl|LJGI|TC63583 |
599 |
87.6 |
87.6 |
similar to UniRef100_Q93X15 Cluster: Amino acid permease AAP1; n=1; Vicia faba var. minor|Rep: Amino acid permease AAP1 - Vicia faba var. minor, partial (72%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v1357950.1 |
length: 202 aa. |
| IPR013057 |
Amino acid transporter, transmembrane |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF01490 |
Aa_trans |
2.5e-47 |
1-189 |
| no_ID |
|
| HMMPanther |
PTHR22950 |
AMINO |
2.1e-61 |
1-202 |
| HMMPanther |
PTHR22950:SF9 |
SUBFAMILY |
2.1e-61 |
1-202 |
| ProfileScan |
PS51257 |
PROKAR_LIPOPROTEIN |
6.000 |
1-21 |
| Seg |
seg |
seg |
NA |
170-190 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
5 |
27 |
| 43 |
65 |
| 114 |
136 |
| 170 |
192 |
- Wolf-PSORT
Lj1g3v1357950.1 plas 4, extr 4, vacu 3, chlo 1, E.R. 1, golg 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v1357950.1 |
|