Miyakogusa Predicted Gene
- Lj1g3v1357930.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
Q56H85_PEA |
551 |
64.5 |
76.6 |
(tr|Q56H85) Amino acid transporter (Fragment) OS=Pisum sativum GN=AAP2 PE=2 SV=1 |
| TAIR_pep |
AT5G09220.1 |
496 |
56.9 |
74.9 |
| Symbols: AAP2 | amino acid permease 2 | chr5:2866867-2868863 FORWARD LENGTH=493 |
| Medicago |
Medtr3g096830.1 |
526 |
67.3 |
76.6 |
| transmembrane amino acid transporter family protein | HC | chr3:44319007-44314187 | 20130731 |
| Soybean |
Glyma04g38650.1 |
543 |
64.0 |
75.8 |
|
| LJGI |
gnl|LJGI|TC63583 |
842 |
87.1 |
87.1 |
similar to UniRef100_Q93X15 Cluster: Amino acid permease AAP1; n=1; Vicia faba var. minor|Rep: Amino acid permease AAP1 - Vicia faba var. minor, partial (72%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v1357930.1 |
length: 369 aa. |
| IPR013057 |
Amino acid transporter, transmembrane |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF01490 |
Aa_trans |
9e-67 |
75-354 |
| no_ID |
|
| HMMPanther |
PTHR22950 |
AMINO |
3.1e-91 |
1-369 |
| HMMPanther |
PTHR22950:SF9 |
SUBFAMILY |
3.1e-91 |
1-369 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
5 |
27 |
| 55 |
77 |
| 84 |
106 |
| 134 |
156 |
| 172 |
194 |
| 196 |
218 |
| 220 |
242 |
| 279 |
301 |
| 334 |
356 |
- Wolf-PSORT
Lj1g3v1357930.1 plas 8, vacu 2, golg 2, chlo 1, extr 1, E.R._vacu 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v1357930.1 |
|