| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | G7JC45_MEDTR | 703 | 81.4 | 85.8 | (tr|G7JC45) E3 ubiquitin-protein ligase mib1 OS=Medicago truncatula GN=MTR_3g096520 PE=4 SV=1 |
| TAIR_pep | AT5G63970.2 | 540 | 70.9 | 82.3 | | Symbols: | Copine (Calcium-dependent phospholipid-binding protein) family | chr5:25607006-25608916 REVERSE LENGTH=367 |
| Medicago | Medtr3g096520.2 | 719 | 81.6 | 86.0 | | E3 ubiquitin-protein ligase RGLG2-like protein | HC | chr3:44128294-44132918 | 20130731 |
| Soybean | Glyma04g38830.2 | 690 | 78.6 | 84.1 | |
| LJGI | gnl|LJGI|TC78635 | 2454 | 99.6 | 99.6 | similar to UniRef100_A7QST8 Cluster: Chromosome chr4 scaffold_162, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_162, whole genome shotgun sequence - Vitis vinifera (Grape), partial (76%) |
| Lj1g3v1353690.1 | length: 419 aa. | |||
| IPR001841 | Zinc finger, RING-type | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0005515 | protein binding | ||
| Molecular Function | GO:0008270 | zinc ion binding | ||
| HMMSmart | SM00184 | Ring | 0.0014 | 378-410 |
| ProfileScan | PS50089 | ZF_RING_2 | 11.471 | 378-411 |
| IPR002035 | von Willebrand factor, type A | |||
| Molecular Function | GO:0005515 | protein binding | ||
| HMMSmart | SM00327 | von | 8.4e-10 | 91-294 |
| IPR010734 | Copine | |||
| HMMPfam | PF07002 | Copine | 4.1e-52 | 116-264 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | |||
| Gene3D | G3DSA:3.30.40.10 | no description | 2.8e-07 | 375-416 |
| no_ID | ||||
| HMMPanther | PTHR10857 | COPINE | 1.2e-136 | 70-344 |
| HMMPfam | PF13920 | zf-C3HC4_3 | 1.9e-09 | 377-416 |
| superfamily | SSF53300 | vWA-like | 2.9e-12 | 87-287 |
| superfamily | SSF57850 | RING/U-box | 3.3e-07 | 373-417 |
Lj1g3v1353690.1 nucl 9, chlo 2, cyto 1, vacu 1, cysk 1, chlo_mito 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj1g3v1353690.1 |