Miyakogusa Predicted Gene

Lj1g3v1353680.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KU21_SOYBN 1253 94.9 97.4 (tr|I1KU21) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G56070.1 1191 89.4 94.6 | Symbols: LOS1 | Ribosomal protein S5/Elongation factor G/III/V family protein | chr1:20968245-20971077 REVERSE LENGTH=843
Medicago Medtr2g069310.1 1247 94.2 97.0 | translation elongation factor EF-2 subunit | HC | chr2:28791281-28795829 | 20130731
Soybean Glyma08g18110.1 1253 94.9 97.4  
LJGI gnl|LJGI|TC75757 2997 95.2 95.2 homologue to UniRef100_Q9SGT4 Cluster: Elongation factor EF-2; n=1; Arabidopsis thaliana|Rep: Elongation factor EF-2 - Arabidopsis thaliana (Mouse-ear cress), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1353680.1 length: 629 aa.
IPR000640 Translation elongation factor EFG, V domain
method AccNumber shortName E-value location
Gene3D G3DSA:3.30.70.240 no description 1.2e-45 514-615
HMMPfam PF00679 EFG_C 4.9e-19 510-597
HMMSmart SM00838 Elongation 7.4e-17 510-599
IPR004161 Translation elongation factor EFTu/EF1A, domain 2
Molecular Function GO:0005525 GTP binding    
HMMPfam PF03144 GTP_EFTU_D2 2.4e-12 179-254
IPR005517 Translation elongation factor EFG/EF2, domain IV
Molecular Function GO:0005525 GTP binding    
HMMPfam PF03764 EFG_IV 4.2e-36 392-508
HMMSmart SM00889 Elongation 1.9e-23 391-508
IPR009000 Translation elongation/initiation factor/Ribosomal, beta-barrel
superfamily SSF50447 Translation 1.6e-40 128-265
IPR009022 Elongation factor G, III-V domain
superfamily SSF54980 EF-G 9.1e-20 513-629
268-347
IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup
Gene3D G3DSA:3.30.230.10 no description 2e-65 359-513
IPR020568 Ribosomal protein S5 domain 2-type fold
superfamily SSF54211 Ribosomal 2.2e-72 348-512
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.6e-23 5-127
no_ID  
Gene3D G3DSA:2.40.30.10 no description 2.9e-53 124-270
Gene3D G3DSA:3.30.70.870 no description 6e-23 272-347
Gene3D G3DSA:3.90.1430.10 no description 3.2e-37 10-112
HMMPanther PTHR23115 TRANSLATION 4.7e-269 8-629
HMMPanther PTHR23115:SF4 EUKARYOTIC 4.7e-269 8-629
Wolf-PSORT
Lj1g3v1353680.1	chlo 6, nucl 2, cyto 2, golg 2, cyto_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1353680.1