Miyakogusa Predicted Gene

Lj1g3v1329370.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KBK0_SOYBN 571 72.7 81.5 (tr|I1KBK0) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G19380.1 159 29.9 48.8 | Symbols: PUB25 | plant U-box 25 | chr3:6714602-6715867 REVERSE LENGTH=421
Medicago Medtr3g096370.1 509 67.7 77.3 | E3 ubiquitin ligase PUB14 | HC | chr3:44050741-44048824 | 20130731
Soybean Glyma06g15960.1 518 67.5 74.6  
LJGI gnl|LJGI|TC81073 1505 99.1 99.1 weakly similar to UniRef100_A7R3F8 Cluster: Chromosome chr4 scaffold_519, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_519, whole genome shotgun sequence - Vitis vinifera (Grape), partial (7%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1329370.1 length: 406 aa.
IPR003613 U box domain
method AccNumber shortName E-value location
Cellular Component GO:0000151 ubiquitin ligase complex    
Molecular Function GO:0004842 ubiquitin-protein ligase activity    
Biological Process GO:0016567 protein ubiquitination    
HMMPfam PF04564 U-box 1.1e-18 10-78
HMMSmart SM00504 Modified 6.2e-31 13-76
IPR011989 Armadillo-like helical
Gene3D G3DSA:1.25.10.10 no description 5.2e-15 65-394
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 2.1e-28 10-64
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 6.4e-11 93-394
no_ID  
HMMPanther PTHR22849 WDSAM1 2e-46 8-401
HMMPanther PTHR22849:SF0 SUBFAMILY 2e-46 8-401
Seg seg seg NA 136-145
382-395
superfamily SSF57850 RING/U-box 3.3e-24 9-78
Wolf-PSORT
Lj1g3v1329370.1	chlo 6, nucl 2, mito 2, extr 2, cyto 1, vacu 1, cyto_mito 1, cysk_nucl 1, nucl_plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1329370.1