Miyakogusa Predicted Gene

Lj1g3v1318060.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7LE04_MEDTR 844 56.7 65.8 (tr|G7LE04) Zinc finger CCCH domain-containing protein OS=Medicago truncatula GN=MTR_8g093480 PE=4 SV=1
TAIR_pep AT3G18640.1 155 28.7 43.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family protein | chr3:6413617-6415829 REVERSE LENGTH=676
Medicago Medtr8g093480.4 844 56.7 65.8 | zinc finger C-x8-C-x5-C-x3-H type family protein | HC | chr8:39048437-39057630 | 20130731
Soybean Glyma06g15720.1 768 53.1 64.5  
LJGI gnl|LJGI|TC67886 1124 99.3 99.3 weakly similar to UniRef100_A7NSJ8 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (16%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1318060.1 length: 802 aa.
IPR000571 Zinc finger, CCCH-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
Gene3D G3DSA:4.10.1000.10 no description 0.00084 147-169
HMMPfam PF00642 zf-CCCH 0.00012 148-168
HMMSmart SM00356 zinc 0.00062 143-169
203-229
267-293
ProfileScan PS50103 ZF_C3H1 15.037 148-170
203-231
267-294
no_ID  
Seg seg seg NA 112-123
295-310
754-765
superfamily SSF90229 CCCH 0.0012 265-293
141-169
201-229
Wolf-PSORT
Lj1g3v1318060.1	nucl 12, chlo 1, plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1318060.1