Miyakogusa Predicted Gene
- Lj1g3v1265880.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
M5WHM2_PRUPE |
297 |
75.4 |
82.7 |
(tr|M5WHM2) Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011961mg PE=4 SV=1 |
| TAIR_pep |
AT3G18800.1 |
241 |
64.5 |
72.6 |
| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; Has 58 Blast hits to 58 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:6479746-6480339 FORWARD LENGTH=197 |
| Medicago |
Medtr3g095480.1 |
296 |
78.9 |
82.0 |
| transmembrane protein, putative | HC | chr3:43629952-43629127 | 20130731 |
| Soybean |
Glyma06g15490.1 |
291 |
76.5 |
80.1 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v1265880.1 |
length: 189 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Seg |
seg |
seg |
NA |
51-66 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
47 |
66 |
| 77 |
99 |
| 166 |
188 |
- Wolf-PSORT
Lj1g3v1265880.1 cyto_E.R. 5, cyto 4.5, E.R. 4.5, nucl 1, plas 1, vacu 1, cysk 1, golg 1, cysk_nucl 1, nucl_plas 1, golg_plas 1, cysk_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v1265880.1 |
|