Miyakogusa Predicted Gene
- Lj1g3v1265870.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SWU6_MEDTR |
329 |
66.0 |
74.0 |
(tr|I3SWU6) Uncharacterized protein OS=Medicago truncatula PE=2 SV=1 |
| TAIR_pep |
AT2G18465.1 |
118 |
49.0 |
61.5 |
| Symbols: | Chaperone DnaJ-domain superfamily protein | chr2:8003223-8004742 REVERSE LENGTH=268 |
| Medicago |
Medtr3g095470.1 |
331 |
66.3 |
74.4 |
| chaperone DnaJ domain protein | HC | chr3:43625077-43628969 | 20130731 |
| Soybean |
Glyma04g39420.1 |
310 |
63.0 |
72.6 |
|
| LJGI |
gnl|LJGI|TC71576 |
1659 |
100.0 |
100.0 |
similar to UniRef100_A7QBC5 Cluster: Chromosome chr4 scaffold_73, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_73, whole genome shotgun sequence - Vitis vinifera (Grape), partial (47%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v1265870.1 |
length: 277 aa. |
| IPR001623 |
DnaJ domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:1.10.287.110 |
no description |
8.1e-12 |
218-272 |
| HMMPfam |
PF00226 |
DnaJ |
2.2e-10 |
218-274 |
| HMMSmart |
SM00271 |
DnaJ |
1.9e-11 |
213-275 |
| ProfileScan |
PS50076 |
DNAJ_2 |
10.803 |
214-275 |
| superfamily |
SSF46565 |
Chaperone |
2.3e-09 |
218-272 |
| no_ID |
|
| HMMPanther |
PTHR25040 |
FAMILY |
5.6e-33 |
140-277 |
| HMMPanther |
PTHR25040:SF11 |
SUBFAMILY |
5.6e-33 |
140-277 |
| Seg |
seg |
seg |
NA |
118-136 |
- Wolf-PSORT
Lj1g3v1265870.1 nucl 6, mito 5, chlo 3, cyto_nucl 3, cysk_nucl 3, nucl_plas 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v1265870.1 |
|