Miyakogusa Predicted Gene
- Lj1g3v1255840.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7JAW7_MEDTR |
214 |
73.9 |
86.2 |
(tr|G7JAW7) Auxin-induced protein 5NG4 OS=Medicago truncatula GN=MTR_3g095450 PE=4 SV=1 |
| TAIR_pep |
AT5G64700.1 |
123 |
45.1 |
63.4 |
| Symbols: | nodulin MtN21 /EamA-like transporter family protein | chr5:25865190-25866845 REVERSE LENGTH=359 |
| Medicago |
Medtr3g095440.2 |
214 |
74.8 |
85.6 |
| nodulin MtN21/EamA-like transporter family protein | HC | chr3:43609253-43610543 | 20130731 |
| Soybean |
Glyma06g15460.1 |
136 |
48.9 |
67.6 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v1255840.1 |
length: 139 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR31218 |
FAMILY |
2.2e-44 |
1-138 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
12 |
34 |
| 66 |
88 |
| 95 |
117 |
- Wolf-PSORT
Lj1g3v1255840.1 plas 4.5, mito 3, cyto_plas 3, chlo 2, golg 2, E.R. 1, pero 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v1255840.1 |
|