Miyakogusa Predicted Gene

Lj1g3v1218950.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JAA2_MEDTR 503 71.8 82.2 (tr|G7JAA2) F-box/kelch-repeat protein SKIP6 OS=Medicago truncatula GN=MTR_3g094850 PE=4 SV=1
TAIR_pep AT2G21950.1 375 54.0 67.5 | Symbols: SKIP6 | SKP1 interacting partner 6 | chr2:9353526-9354644 REVERSE LENGTH=372
Medicago Medtr3g094850.1 503 71.8 82.2 | SKP1 interacting partner 6 | HC | chr3:43291998-43294723 | 20130731
Soybean Glyma04g39720.1 499 72.3 81.3  
LJGI gnl|LJGI|TC63812 1473 100.0 100.0 weakly similar to UniRef100_Q9SJ04 Cluster: F-box/kelch-repeat protein SKIP6; n=1; Arabidopsis thaliana|Rep: F-box/kelch-repeat protein SKIP6 - Arabidopsis thaliana (Mouse-ear cress), partial (61%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1218950.1 length: 359 aa.
IPR001810 F-box domain, cyclin-like
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00646 F-box 3.2e-05 19-56
superfamily SSF81383 F-box 8.6e-08 9-91
IPR006652 Kelch repeat type 1
Molecular Function GO:0005515 protein binding    
HMMPfam PF01344 Kelch_1 4.8e-08 106-147
149-197
HMMSmart SM00612 no description 1.8 114-160
161-212
IPR015916 Galactose oxidase, beta-propeller
Gene3D G3DSA:2.130.10.80 no description 2.2e-42 45-321
no_ID  
HMMPanther PTHR32188 FAMILY 1.2e-72 2-359
HMMPanther PTHR32188:SF1 SUBFAMILY 1.2e-72 2-359
Seg seg seg NA 8-17
93-104
superfamily SSF117281 Kelch 4.2e-54 69-344
Wolf-PSORT
Lj1g3v1218950.1	cyto 11, chlo 1, plas 1, E.R._vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1218950.1