Miyakogusa Predicted Gene

Lj1g3v1207870.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1JY96_SOYBN 1429 73.8 80.1 (tr|I1JY96) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G10020.1 1102 56.3 68.5 | Symbols: | Leucine-rich receptor-like protein kinase family protein | chr5:3133514-3136949 FORWARD LENGTH=1048
Medicago Medtr3g094710.1 1417 71.3 77.9 | LRR receptor-like kinase family protein | HC | chr3:43213728-43208361 | 20130731
Soybean Glyma04g39820.1 1429 73.8 80.1  
LJGI gnl|LJGI|TC82578 1762 100.0 100.0 weakly similar to UniRef100_A7PL28 Cluster: Chromosome chr7 scaffold_20, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_20, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1207870.1 length: 1054 aa.
IPR000719 Protein kinase, catalytic domain
method AccNumber shortName E-value location
Molecular Function GO:0004672 protein kinase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006468 protein phosphorylation    
HMMPfam PF00069 Pkinase 5.6e-24 777-976
ProfileScan PS50011 PROTEIN_KINASE_DOM 28.556 773-1054
IPR001611 Leucine-rich repeat
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.0067 144-162
270-291
515-534
ProfileScan PS51450 LRR 4.793 144-166
168-191
192-214
216-237
270-292
293-314
340-362
318-339
433-454
466-487
514-536
490-512
IPR002290 Serine/threonine- / dual specificity protein kinase, catalytic domain
Molecular Function GO:0004672 protein kinase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006468 protein phosphorylation    
HMMSmart SM00220 Serine/Threonine 1e-10 773-1050
IPR003591 Leucine-rich repeat, typical subtype
HMMSmart SM00369 Leucine-rich 34 142-166
190-210
214-241
291-315
512-536
IPR011009 Protein kinase-like domain
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups    
superfamily SSF56112 Protein 2.1e-45 741-1048
IPR013210 Leucine-rich repeat-containing N-terminal, type 2
HMMPfam PF08263 LRRNT_2 4.6e-08 46-90
IPR020635 Tyrosine-protein kinase, catalytic domain
Molecular Function GO:0004713 protein tyrosine kinase activity    
Biological Process GO:0006468 protein phosphorylation    
HMMSmart SM00219 Tyrosine 2.8e-06 777-1048
no_ID  
Gene3D G3DSA:1.10.510.10 no description 6.2e-25 826-977
Gene3D G3DSA:3.30.200.20 no description 1.1e-07 764-825
Gene3D G3DSA:3.80.10.10 no description 4.3e-22 47-251
252-448
465-559
HMMPanther PTHR24420 FAMILY 0 100-1052
HMMPanther PTHR24420:SF51 SUBFAMILY 0 100-1052
HMMPfam PF13516 LRR_6 0.15 214-233
Seg seg seg NA 13-23
25-37
115-126
290-304
338-359
446-464
489-500
599-615
715-733
superfamily SSF52058 L 1.1e-29 127-356
359-552
Putative transmembrane regions
  From To
TM segments
SOSUI
25 47
599 621
Wolf-PSORT
Lj1g3v1207870.1	plas 8, chlo 2, E.R. 2, nucl 1, pero 1, chlo_mito 1, E.R._vacu 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1207870.1