Miyakogusa Predicted Gene

Lj1g3v1182090.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL Q56VR0_LOTJA 471 94.3 94.3 (tr|Q56VR0) Superoxide dismutase OS=Lotus japonicus GN=sodA PE=1 SV=1
TAIR_pep AT3G10920.1 365 72.5 78.1 | Symbols: MSD1, MEE33, ATMSD1 | manganese superoxide dismutase 1 | chr3:3418015-3419581 FORWARD LENGTH=231
Medicago Medtr3g094250.1 391 79.7 85.1 | superoxide dismutase | HC | chr3:43080786-43075424 | 20130731
Soybean Glyma06g14960.1 412 83.3 86.5  
LJGI gnl|LJGI|TC69295 1461 99.9 99.9 UniRef100_Q56VR0 Cluster: Mn-superoxide dismutase; n=1; Lotus japonicus|Rep: Mn-superoxide dismutase - Lotus japonicus, complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1182090.1 length: 246 aa.
IPR001189 Manganese/iron superoxide dismutase
method AccNumber shortName E-value location
Molecular Function GO:0004784 superoxide dismutase activity    
Biological Process GO:0006801 superoxide metabolic process    
Molecular Function GO:0046872 metal ion binding    
Biological Process GO:0055114 oxidation-reduction process    
FPrintScan PR01703 MNSODISMTASE 5e-26 48-59
69-82
108-121
164-172
204-216
HMMPIR PIRSF000349 Superoxide 2.7e-94 26-245
HMMPanther PTHR11404 SUPEROXIDE 5.5e-124 46-242
IPR019831 Manganese/iron superoxide dismutase, N-terminal
Molecular Function GO:0004784 superoxide dismutase activity    
Biological Process GO:0006801 superoxide metabolic process    
Molecular Function GO:0046872 metal ion binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF00081 Sod_Fe_N 3.1e-33 46-125
superfamily SSF46609 Fe,Mn 1.5e-36 32-126
IPR019832 Manganese/iron superoxide dismutase, C-terminal
Molecular Function GO:0004784 superoxide dismutase activity    
Biological Process GO:0006801 superoxide metabolic process    
Molecular Function GO:0046872 metal ion binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF02777 Sod_Fe_C 3.8e-39 134-240
superfamily SSF54719 Fe,Mn 2e-39 133-246
IPR019833 Manganese/iron superoxide dismutase, binding site
Molecular Function GO:0004784 superoxide dismutase activity    
Biological Process GO:0006801 superoxide metabolic process    
Molecular Function GO:0046872 metal ion binding    
Biological Process GO:0055114 oxidation-reduction process    
PatternScan PS00088 SOD_MN NA 206-213
no_ID  
Gene3D G3DSA:1.10.287.990 no description 6.1e-28 62-125
HMMPanther PTHR11404:SF5 SUPEROXIDE 5.5e-124 46-242
Seg seg seg NA 22-35
Wolf-PSORT
Lj1g3v1182090.1	mito 12, chlo 1, plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1182090.1