Miyakogusa Predicted Gene
- Lj1g3v1182050.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7MFC9_SOYBN |
459 |
70.4 |
83.9 |
(tr|K7MFC9) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT3G56320.1 |
349 |
56.4 |
75.6 |
| Symbols: | PAP/OAS1 substrate-binding domain superfamily | chr3:20886193-20888624 REVERSE LENGTH=603 |
| Medicago |
Medtr3g094170.1 |
471 |
74.9 |
87.6 |
| nucleotidyltransferase domain protein | HC | chr3:43032911-43038036 | 20130731 |
| Soybean |
Glyma16g06010.1 |
460 |
70.4 |
83.9 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v1182050.1 |
length: 313 aa. |
| IPR002934 |
Nucleotidyl transferase domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0016779 |
nucleotidyltransferase activity |
|
|
| HMMPfam |
PF01909 |
NTP_transf_2 |
3.9e-07 |
52-120 |
| IPR007012 |
Poly(A) polymerase, central domain |
| Molecular Function |
GO:0004652 |
polynucleotide adenylyltransferase activity |
|
|
| Biological Process |
GO:0043631 |
RNA polyadenylation |
|
|
| HMMPfam |
PF04928 |
PAP_central |
0.00014 |
49-246 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
93-114 |
| Gene3D |
G3DSA:3.30.460.10 |
no description |
1.6e-17 |
47-171 |
| HMMPanther |
PTHR23092 |
TOPOISOMERASE-RELATED |
3.7e-103 |
1-312 |
| HMMPanther |
PTHR23092:SF18 |
NUCLEOTIDYLTRANSFERASE |
3.7e-103 |
1-312 |
| superfamily |
SSF81301 |
Nucleotidyltransferase |
2.7e-25 |
11-179 |
| superfamily |
SSF81631 |
PAP/OAS1 |
7.9e-21 |
167-313 |
- Wolf-PSORT
Lj1g3v1182050.1 chlo 4, cyto 3, nucl 2, cyto_pero 2, cyto_E.R. 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v1182050.1 |
|