Miyakogusa Predicted Gene

Lj1g3v1181990.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LM96_SOYBN 729 74.3 84.4 (tr|I1LM96) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G03820.1 612 61.3 76.5 | Symbols: | nonsense-mediated mRNA decay NMD3 family protein | chr2:1165149-1166699 REVERSE LENGTH=516
Medicago Medtr3g064880.1 683 68.4 80.3 | nonsense-mediated mRNA decay NMD3 family protein | HC | chr3:29269880-29272912 | 20130731
Soybean Glyma11g33380.1 729 74.3 84.4  
LJGI gnl|LJGI|TC76638 1104 89.1 89.1 similar to UniRef100_A7PYY1 Cluster: Chromosome chr4 scaffold_39, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_39, whole genome shotgun sequence - Vitis vinifera (Grape), partial (64%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1181990.1 length: 522 aa.
IPR007064 NMD3
method AccNumber shortName E-value location
HMMPfam PF04981 NMD3 5.7e-68 25-260
no_ID  
HMMPanther PTHR12746 NONSENSE-MEDIATED 2e-217 1-522
HMMPanther PTHR12746:SF0 SUBFAMILY 2e-217 1-522
Seg seg seg NA 328-346
494-518
Wolf-PSORT
Lj1g3v1181990.1	cyto 6, nucl 5, plas 1, cysk 1, E.R._vacu 1, cysk_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1181990.1