Miyakogusa Predicted Gene

Lj1g3v1169750.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JYB7_SOYBN 201 69.9 78.3 (tr|I1JYB7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G10910.1 130 48.0 57.9 | Symbols: | RING/U-box superfamily protein | chr3:3413068-3413613 REVERSE LENGTH=181
Medicago Medtr3g094000.1 191 67.1 75.2 | RING-H2 zinc finger protein | HC | chr3:42946379-42944478 | 20130731
Soybean Glyma04g40020.1 201 69.9 78.3  
LJGI gnl|LJGI|AV770943 141 90.8 90.8 similar to UniRef100_A7QFN6 Cluster: Chromosome chr8 scaffold_88, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_88, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1169750.1 length: 162 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 4.5e-17 115-159
HMMSmart SM00184 Ring 9.1e-07 116-157
ProfileScan PS50089 ZF_RING_2 12.224 116-158
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.9e-19 113-160
no_ID  
HMMPanther PTHR14155 RING 2.9e-26 43-158
Seg seg seg NA 3-15
superfamily SSF57850 RING/U-box 3.9e-18 115-161
Putative transmembrane regions
  From To
TM segments
SOSUI		 42 64
Wolf-PSORT
Lj1g3v1169750.1	chlo 9, extr 3, mito 1, plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1169750.1