Miyakogusa Predicted Gene

Lj1g3v1147550.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JYC1_SOYBN 737 78.4 88.0 (tr|I1JYC1) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G56370.1 521 57.7 72.9 | Symbols: | Leucine-rich repeat protein kinase family protein | chr3:20899403-20902390 REVERSE LENGTH=964
Medicago Medtr3g093930.1 740 77.7 88.2 | leucine-rich receptor-like kinase family protein | HC | chr3:42916167-42919917 | 20130731
Soybean Glyma04g40080.1 737 78.4 88.0  
LJGI gnl|LJGI|BP062816 452 97.3 97.3 similar to UniRef100_A7Q3X5 Cluster: Chromosome chr13 scaffold_48, whole genome shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome chr13 scaffold_48, whole genome shotgun sequence - Vitis vinifera (Grape), partial (5%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1147550.1 length: 497 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.14 202-219
225-247
ProfileScan PS51450 LRR 5.017 128-150
104-126
201-223
225-247
297-319
321-343
397-423
469-491
IPR003591 Leucine-rich repeat, typical subtype
HMMSmart SM00369 Leucine-rich 28 126-150
199-222
223-247
295-319
395-418
419-443
IPR013210 Leucine-rich repeat-containing N-terminal, type 2
HMMPfam PF08263 LRRNT_2 3.4e-08 33-75
no_ID  
FPrintScan PR00019 LEURICHRPT 6.3e-06 129-142
419-432
Gene3D G3DSA:3.80.10.10 no description 1.8e-28 35-260
261-377
378-497
HMMPanther PTHR24420 FAMILY 2.2e-163 109-497
HMMPanther PTHR24420:SF291SUBFAMILY NOT 2.2e-163 109-497
HMMPfam PF13855 LRR_8 3.8e-07 105-163
297-355
397-456
Seg seg seg NA 9-29
419-433
superfamily SSF52058 L 4.6e-26 36-383
358-497
Putative transmembrane regions
  From To
TM segments
SOSUI		 15 37
Wolf-PSORT
Lj1g3v1147550.1	chlo 5, vacu 5, nucl 1, extr 1, E.R. 1, golg 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1147550.1