Miyakogusa Predicted Gene

Lj1g3v1135190.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JXT8_MEDTR 256 56.2 73.1 (tr|G7JXT8) Polygalacturonase OS=Medicago truncatula GN=MTR_5g043350 PE=3 SV=1
TAIR_pep AT4G35670.1 188 47.2 64.6 | Symbols: | Pectin lyase-like superfamily protein | chr4:16914996-16917201 FORWARD LENGTH=394
Medicago Medtr5g043350.1 256 56.2 73.1 | polygalacturonase/glycoside hydrolase family protein | LC | chr5:19058555-19056081 | 20130731
Soybean Glyma11g16430.1 221 52.6 68.4  
LJGI gnl|LJGI|TC80731 256 96.7 96.7 similar to UniRef100_Q2KMJ7 Cluster: PGN; n=2; Glycine max|Rep: PGN - Glycine max (Soybean), partial (35%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1135190.1 length: 212 aa.
IPR000743 Glycoside hydrolase, family 28
method AccNumber shortName E-value location
Molecular Function GO:0004650 polygalacturonase activity    
Biological Process GO:0005975 carbohydrate metabolic process    
HMMPfam PF00295 Glyco_hydro_28 1e-37 51-211
IPR011050 Pectin lyase fold/virulence factor
superfamily SSF51126 Pectin 8.9e-55 18-211
IPR012334 Pectin lyase fold
Gene3D G3DSA:2.160.20.10 no description 8.6e-60 15-211
no_ID  
HMMPanther PTHR31736 FAMILY 3.1e-77 1-211
HMMPanther PTHR31736:SF0 SUBFAMILY 3.1e-77 1-211
Seg seg seg NA 166-179
Wolf-PSORT
Lj1g3v1135190.1	nucl 8, chlo 3, cyto 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1135190.1