Miyakogusa Predicted Gene

Lj1g3v1112870.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KUZ5_SOYBN 738 87.5 93.3 (tr|K7KUZ5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G56440.1 579 73.1 84.1 | Symbols: ATATG18D, ATG18D | homolog of yeast autophagy 18 (ATG18) D | chr3:20926874-20928797 FORWARD LENGTH=391
Medicago Medtr3g093590.2 713 81.4 88.7 | WD repeat phosphoinositide-interacting-like protein | HC | chr3:42763022-42768303 | 20130731
Soybean Glyma06g14550.1 738 87.5 93.3  
LJGI gnl|LJGI|TC66820 1275 99.8 99.8 similar to UniRef100_A7Q3D3 Cluster: Chromosome chr13 scaffold_48, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_48, whole genome shotgun sequence - Vitis vinifera (Grape), partial (50%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1112870.1 length: 422 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 0.0029 274-300
HMMSmart SM00320 WD40 0.06 43-82
134-169
216-256
259-300
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 1.2e-21 50-302
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
superfamily SSF50978 WD40 7.2e-29 58-302
no_ID  
HMMPanther PTHR11227 WD-REPEAT 1.1e-203 25-422
HMMPanther PTHR11227:SF18 WIPI-3,4 1.1e-203 25-422
Seg seg seg NA 7-20
Wolf-PSORT
Lj1g3v1112870.1	chlo 4, vacu 4, E.R. 2, nucl 1, mito 1, plas 1, golg 1, nucl_plas 1, golg_plas 1, mito_plas 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1112870.1