Miyakogusa Predicted Gene

Lj1g3v1092740.3

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL K7KUZ1_SOYBN 1483 70.9 77.9 (tr|K7KUZ1) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT3G14172.1 110 30.8 53.3 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT1G72410.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr3:4698860-4704773 REVERSE LENGTH=1270

Medicago Medtr3g093470.2 1412 69.2 75.5 | COP1-interacting-like protein, putative | HC | chr3:42718020-42711454 | 20130731

Soybean Glyma04g40300.1 1300 63.7 70.2

LJGI gnl|LJGI|GO036275 1247 99.5 99.5 similar to UniRef100_A7Q3C6 Cluster: Chromosome chr13 scaffold_48, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_48, whole genome shotgun sequence - Vitis vinifera (Grape), partial (5%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj1g3v1092740.3 length: 1097 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 285-301
434-445
689-715
739-754
1073-1089

Wolf-PSORT

Lj1g3v1092740.3 nucl 14

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v1092740.3

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	K7KUZ1_SOYBN	1483	70.9	77.9	(tr\|K7KUZ1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT3G14172.1	110	30.8	53.3	\| Symbols: \| FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT1G72410.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). \| chr3:4698860-4704773 REVERSE LENGTH=1270
Medicago	Medtr3g093470.2	1412	69.2	75.5	\| COP1-interacting-like protein, putative \| HC \| chr3:42718020-42711454 \| 20130731
Soybean	Glyma04g40300.1	1300	63.7	70.2
LJGI	gnl\|LJGI\|GO036275	1247	99.5	99.5	similar to UniRef100_A7Q3C6 Cluster: Chromosome chr13 scaffold_48, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr13 scaffold_48, whole genome shotgun sequence - Vitis vinifera (Grape), partial (5%)

no_ID
Lj1g3v1092740.3				length: 1097 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	285-301 434-445 689-715 739-754 1073-1089