Miyakogusa Predicted Gene

Lj1g3v1079330.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7L1T9_SOYBN 256 41.6 52.9 (tr|K7L1T9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G23880.1 94.0 27.8 41.0 | Symbols: | F-box and associated interaction domains-containing protein | chr3:8622061-8623155 REVERSE LENGTH=364
Medicago Medtr4g023090.1 193 35.2 47.2 | galactose oxidase | LC | chr4:7774369-7773209 | 20130731
Soybean Glyma08g27950.1 251 42.7 52.7  
LJGI gnl|LJGI|FS341314 383 87.2 87.2 similar to UniRef100_A7Q9Q0 Cluster: Chromosome chr5 scaffold_67, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_67, whole genome shotgun sequence - Vitis vinifera (Grape), partial (16%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1079330.1 length: 527 aa.
IPR001810 F-box domain, cyclin-like
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00646 F-box 2.1e-06 10-44
HMMSmart SM00256 A 2.6e-06 10-50
ProfileScan PS50181 FBOX 8.888 4-50
superfamily SSF81383 F-box 1.3e-13 10-132
IPR017451 F-box associated interaction domain
HMMTigr TIGR01640 F_box_assoc_1: 4.6e-17 104-306
no_ID  
Coil coil coiled-coil NA 421-449
Gene3D G3DSA:1.20.1280.50 no description 7.8e-09 9-46
HMMPanther PTHR32133 FAMILY 1.3e-15 5-151
Seg seg seg NA 71-81
210-222
398-413
430-504
506-525
Wolf-PSORT
Lj1g3v1079330.1	chlo 5, cyto 2, mito 2, extr 2, nucl 1, plas 1, vacu 1, cyto_mito 1, nucl_plas 1, cyto_pero 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1079330.1