Miyakogusa Predicted Gene

Lj1g3v1077730.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7KYM2_MEDTR 750 79.6 86.0 (tr|G7KYM2) 5'-AMP-activated protein kinase subunit beta-1 OS=Medicago truncatula GN=MTR_7g113330 PE=4 SV=1
TAIR_pep AT1G09020.1 652 65.4 77.5 | Symbols: SNF4, ATSNF4 | homolog of yeast sucrose nonfermenting 4 | chr1:2900149-2904212 REVERSE LENGTH=487
Medicago Medtr7g113330.1 750 79.6 86.0 | sucrose nonfermenting-like protein | HC | chr7:46661673-46668826 | 20130731
Soybean Glyma19g42290.1 741 78.1 86.7  
LJGI gnl|LJGI|TC75388 2627 99.8 99.8 similar to UniRef100_Q84PE0 Cluster: AKIN betagamma; n=1; Medicago truncatula|Rep: AKIN betagamma - Medicago truncatula (Barrel medic), partial (88%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1077730.1 length: 483 aa.
IPR000644 Cystathionine beta-synthase, core
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00571 CBS 8.6e-12 168-217
350-394
433-482
HMMSmart SM00116 Domain 0.035 168-217
350-398
433-482
ProfileScan PS51371 CBS 8.867 162-224
346-403
430-483
no_ID  
Gene3D G3DSA:3.10.580.10 no description 4.4e-13 168-290
350-481
HMMPanther PTHR13780 AMP-ACTIVATED 1.4e-118 16-482
HMMPanther PTHR13780:SF13 SUBFAMILY 1.4e-118 16-482
Seg seg seg NA 4-18
320-337
superfamily SSF54631 CBS-domain 0.00057 333-407
154-216
420-481
Wolf-PSORT
Lj1g3v1077730.1	nucl 6, cyto 5, cysk 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1077730.1