Miyakogusa Predicted Gene

Lj1g3v1073610.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T312_LOTJA 154 100.0 100.0 (tr|I3T312) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G32790.1 132 84.9 93.2 | Symbols: CID11 | CTC-interacting domain 11 | chr1:11875174-11877188 REVERSE LENGTH=358
Medicago Medtr3g092550.1 143 89.0 98.6 | CTC-interacting domain protein | HC | chr3:42290596-42284870 | 20130731
Soybean Glyma06g14030.1 146 93.2 98.6  
LJGI gnl|LJGI|TC81719 509 98.5 98.5 similar to UniRef100_Q0WQ17 Cluster: RNA-binding-like protein; n=1; Arabidopsis thaliana|Rep: RNA-binding-like protein - Arabidopsis thaliana (Mouse-ear cress), partial (57%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1073610.1 length: 100 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 7.5e-12 6-73
HMMSmart SM00360 RNA 3e-13 5-76
ProfileScan PS50102 RRM 12.594 4-80
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 3.7e-13 3-76
no_ID  
HMMPanther PTHR24011 FAMILY 6.9e-48 1-88
HMMPanther PTHR24011:SF12 SUBFAMILY 6.9e-48 1-88
Seg seg seg NA 74-98
superfamily SSF54928 RNA-binding 1.8e-16 3-99
Wolf-PSORT
Lj1g3v1073610.1	chlo 5, extr 3, chlo_mito 3, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1073610.1