Miyakogusa Predicted Gene

Lj1g3v1035300.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KG22_SOYBN 266 100.0 100.0 (tr|K7KG22) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G52590.1 261 99.2 99.2 | Symbols: UBQ1, EMB2167, ERD16, HAP4 | ubiquitin extension protein 1 | chr3:19505668-19506681 FORWARD LENGTH=128
Medicago Medtr7g105080.1 261 99.2 99.2 | ubiquitin-60S ribosomal L40 fusion protein | HC | chr7:42609855-42608272 | 20130731
Soybean Glyma19g38170.1 264 100.0 100.0  
LJGI gnl|LJGI|TC64454 773 100.0 100.0 UniRef100_Q45W78 Cluster: Ubiquitin fusion protein; n=3; core eudicotyledons|Rep: Ubiquitin fusion protein - Arachis hypogaea (Peanut), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1035300.1 length: 128 aa.
IPR000626 Ubiquitin
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00240 ubiquitin 1.3e-34 6-74
HMMSmart SM00213 Ubiquitin 3e-35 1-72
IPR001975 Ribosomal protein L40e
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
HMMPfam PF01020 Ribosomal_L40e 1e-30 78-128
IPR019954 Ubiquitin conserved site
PatternScan PS00299 UBIQUITIN_1 NA 27-52
IPR019955 Ubiquitin supergroup
ProfileScan PS50053 UBIQUITIN_2 30.452 1-76
IPR019956 Ubiquitin subgroup
FPrintScan PR00348 UBIQUITIN 4.6e-39 11-31
32-52
53-74
no_ID  
Gene3D G3DSA:3.10.20.90 no description 1.2e-50 1-85
HMMPanther PTHR10666 UBIQUITIN 1.5e-95 1-128
superfamily SSF54236 Ubiquitin-like 1e-34 1-76
Wolf-PSORT
Lj1g3v1035300.1	cyto_nucl 7.5, cyto 6, nucl 5, mito 1, pero 1, cysk 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1035300.1