Miyakogusa Predicted Gene

Lj1g3v1032200.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SJT0_LOTJA 385 81.3 81.3 (tr|I3SJT0) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT4G27700.1 258 72.2 77.8 | Symbols: | Rhodanese/Cell cycle control phosphatase superfamily protein | chr4:13826541-13827673 REVERSE LENGTH=224
Medicago Medtr3g092040.1 308 71.6 79.6 | rhodanese/cell cycle control phosphatase superfamily protein | HC | chr3:42011518-42013354 | 20130731
Soybean Glyma04g41080.1 329 71.1 75.7  
LJGI gnl|LJGI|TC75265 1409 100.0 100.0 similar to UniRef100_A7QEY9 Cluster: Chromosome chr16 scaffold_86, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr16 scaffold_86, whole genome shotgun sequence - Vitis vinifera (Grape), partial (82%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1032200.1 length: 235 aa.
IPR001763 Rhodanese-like domain
method AccNumber shortName E-value location
Gene3D G3DSA:3.40.250.10 no description 1.2e-31 88-230
HMMPfam PF00581 Rhodanese 5.4e-15 93-226
HMMSmart SM00450 Rhodanese 4.9e-24 90-230
ProfileScan PS50206 RHODANESE_3 18.558 100-233
superfamily SSF52821 Rhodanese/Cell 2.6e-24 84-234
no_ID  
HMMPanther PTHR13253 FAMILY 2e-16 86-230
Seg seg seg NA 5-24
62-69
140-154
Wolf-PSORT
Lj1g3v1032200.1	nucl_plas 4.83333, chlo 4, plas 4, nucl 3.5, cyto_nucl 3.16667, cyto 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1032200.1