Miyakogusa Predicted Gene

Lj1g3v1008920.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SF98_LOTJA 350 94.5 94.5 (tr|I3SF98) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G09150.1 307 80.7 88.4 | Symbols: | pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein | chr1:2946599-2948908 FORWARD LENGTH=181
Medicago Medtr3g091920.1 347 92.3 93.9 | MCT-like PUA RNA-binding-domain protein | HC | chr3:41941817-41938411 | 20130731
Soybean Glyma06g13720.1 346 91.7 95.0  
LJGI gnl|LJGI|TC60003 1082 100.0 100.0 homologue to UniRef100_A7PRY4 Cluster: Chromosome chr14 scaffold_27, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_27, whole genome shotgun sequence - Vitis vinifera (Grape), partial (97%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1008920.1 length: 181 aa.
IPR002478 Pseudouridine synthase/archaeosine transglycosylase
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
HMMPfam PF01472 PUA 6.2e-17 93-170
HMMSmart SM00359 Putative 6.9e-12 92-171
ProfileScan PS50890 PUA 14.154 91-171
IPR004521 Uncharacterised domain CHP00451
Molecular Function GO:0003723 RNA binding    
HMMTigr TIGR00451 unchar_dom_2: 1.2e-23 62-172
IPR015947 PUA-like domain
Gene3D G3DSA:2.30.130.10 no description 9.1e-29 90-177
superfamily SSF88697 PUA 4.1e-20 90-179
IPR016437 Translation-associated RNA-binding, predicted
HMMPIR PIRSF005067 Predicted 3.4e-51 1-179
HMMPanther PTHR22798 MCT-1 7.3e-104 1-181
no_ID  
Seg seg seg NA 58-66
Wolf-PSORT
Lj1g3v1008920.1	cyto 12, nucl 1, mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1008920.1