Miyakogusa Predicted Gene

Lj1g3v1008910.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KAW1_SOYBN 1235 82.5 90.8 (tr|I1KAW1) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT4G27730.1 1103 72.2 86.3 | Symbols: ATOPT6, OPT6 | oligopeptide transporter 1 | chr4:13834024-13836468 REVERSE LENGTH=736
Medicago Medtr3g080870.1 1088 71.9 83.4 | oligopeptide transporter OPT family protein | HC | chr3:36608789-36602876 | 20130731
Soybean Glyma04g41140.1 1227 82.4 90.2  
LJGI gnl|LJGI|TC63492 821 94.7 94.7 similar to UniRef100_A7QEZ6 Cluster: Chromosome chr16 scaffold_86, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr16 scaffold_86, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1008910.1 length: 745 aa.
IPR004648 Tetrapeptide transporter, OPT1/isp4
method AccNumber shortName E-value location
Biological Process GO:0055085 transmembrane transport    
HMMTigr TIGR00727 ISP4_OPT: 1.1e-187 29-711
IPR004813 Oligopeptide transporter, OPT superfamily
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF03169 OPT 1.1e-180 52-708
HMMTigr TIGR00728 OPT_sfam: 5.6e-209 37-710
no_ID  
Coil coil coiled-coil NA 10-32
HMMPanther PTHR22601 ISP4 0 1-745
Seg seg seg NA 14-31
Putative transmembrane regions
  From To
TM segments
SOSUI		 53 75
82 104
161 182
229 251
296 318
370 392
425 447
455 476
496 518
540 562
612 634
657 678
697 719
Wolf-PSORT
Lj1g3v1008910.1	plas 12.5, cyto_plas 7
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1008910.1 Not targeted -36.735 -0.114 -4.933 45.73% -31.689