Miyakogusa Predicted Gene

Lj1g3v0998730.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KAV2_SOYBN 516 72.4 78.3 (tr|I1KAV2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G27780.1 411 57.3 72.2 | Symbols: ACBP2 | acyl-CoA binding protein 2 | chr4:13847774-13849629 FORWARD LENGTH=354
Medicago Medtr3g491870.1 512 72.7 77.8 | acyl-CoA-binding domain protein | HC | chr3:41844067-41838580 | 20130731
Soybean Glyma06g13630.1 516 72.4 78.3  
LJGI gnl|LJGI|TC62275 1269 99.8 99.8 similar to UniRef100_A7QF10 Cluster: Chromosome chr16 scaffold_86, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr16 scaffold_86, whole genome shotgun sequence - Vitis vinifera (Grape), partial (57%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0998730.1 length: 355 aa.
IPR000582 Acyl-CoA-binding protein, ACBP
method AccNumber shortName E-value location
Molecular Function GO:0000062 fatty-acyl-CoA binding    
FPrintScan PR00689 ACOABINDINGP 5.2e-09 128-146
151-166
172-189
HMMPfam PF00887 ACBP 1.5e-25 105-192
ProfileScan PS51228 ACB_2 42.036 105-195
superfamily SSF47027 Acyl-CoA 3.5e-29 104-195
IPR002110 Ankyrin repeat
Molecular Function GO:0005515 protein binding    
FPrintScan PR01415 ANKYRIN 5.6e-06 268-283
316-330
HMMSmart SM00248 ankyrin 0.0098 234-263
267-296
300-329
ProfileScan PS50088 ANK_REPEAT 11.621 267-299
300-332
IPR014352 FERM/acyl-CoA-binding protein, 3-helical bundle
Gene3D G3DSA:1.20.80.10 no description 5.9e-29 103-198
IPR020683 Ankyrin repeat-containing domain
Gene3D G3DSA:1.25.40.20 no description 1.5e-32 235-344
HMMPfam PF12796 Ank_2 3e-20 240-331
ProfileScan PS50297 ANK_REP_REGION 31.511 234-337
superfamily SSF48403 Ankyrin 2.7e-30 233-337
no_ID  
HMMPanther PTHR24119 FAMILY 1.4e-37 123-340
Seg seg seg NA 41-66
87-101
108-121
Putative transmembrane regions
  From To
TM segments
SOSUI		 9 31
Wolf-PSORT
Lj1g3v0998730.1	E.R. 4.5, E.R._plas 3.5, nucl 3, mito 3, plas 1.5, chlo_mito 1.5, cyto_mito 1.5, cysk_nucl 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0998730.1