Miyakogusa Predicted Gene
- Lj1g3v0987690.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1KAU9_SOYBN |
630 |
81.0 |
87.9 |
(tr|I1KAU9) Uncharacterized protein OS=Glycine max PE=3 SV=1 |
| TAIR_pep |
AT4G27800.1 |
497 |
63.1 |
74.7 |
| Symbols: TAP38, PPH1 | thylakoid-associated phosphatase 38 | chr4:13852013-13854091 REVERSE LENGTH=388 |
| Medicago |
Medtr3g491830.1 |
601 |
74.7 |
84.7 |
| protein phosphatase 2C-like protein | HC | chr3:41806436-41810585 | 20130731 |
| Soybean |
Glyma06g13600.3 |
630 |
81.0 |
87.9 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v0987690.1 |
length: 388 aa. |
| IPR000222 |
Protein phosphatase 2C, manganese/magnesium aspartate binding site |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004722 |
protein serine/threonine phosphatase activity |
|
|
| Biological Process |
GO:0006470 |
protein dephosphorylation |
|
|
| PatternScan |
PS01032 |
PP2C |
NA |
88-96 |
| IPR001932 |
Protein phosphatase 2C (PP2C)-like |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Gene3D |
G3DSA:3.60.40.10 |
no description |
3e-74 |
50-347 |
| HMMPfam |
PF00481 |
PP2C |
1.9e-56 |
61-340 |
| HMMSmart |
SM00332 |
Serine/threonine |
1.6e-80 |
49-345 |
| superfamily |
SSF81606 |
PP2C-like |
4.3e-68 |
38-348 |
| IPR015655 |
Protein phosphatase 2C |
| HMMPanther |
PTHR13832 |
PROTEIN |
3.6e-170 |
41-381 |
| no_ID |
|
| HMMPanther |
PTHR13832:SF95 |
PROTEIN |
3.6e-170 |
41-381 |
| Seg |
seg |
seg |
NA |
113-124 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
362 |
384 |
- Wolf-PSORT
Lj1g3v0987690.1 chlo 9, golg 2, nucl 1, mito 1, plas 1, nucl_plas 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v0987690.1 |
|