Miyakogusa Predicted Gene

Lj1g3v0986640.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JYP9_SOYBN 834 77.6 83.2 (tr|I1JYP9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G53060.1 557 56.0 69.2 | Symbols: | RNA-binding KH domain-containing protein | chr5:21515355-21518197 FORWARD LENGTH=652
Medicago Medtr3g091800.1 711 67.5 77.6 | RNA-binding KH domain protein | HC | chr3:41793839-41789438 | 20130731
Soybean Glyma04g41270.1 834 77.6 83.2  
LJGI gnl|LJGI|TC65938 777 100.0 100.0 similar to UniRef100_Q9LVU6 Cluster: RNA-binding protein-like; n=1; Arabidopsis thaliana|Rep: RNA-binding protein-like - Arabidopsis thaliana (Mouse-ear cress), partial (12%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0986640.1 length: 542 aa.
IPR004087 K Homology domain
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
HMMSmart SM00322 K 9.7e-05 67-143
220-293
304-378
465-535
IPR004088 K Homology domain, type 1
Molecular Function GO:0003723 RNA binding    
HMMPfam PF00013 KH_1 8.1e-08 71-138
307-369
468-529
ProfileScan PS50084 KH_TYPE_1 12.181 68-138
221-288
466-530
no_ID  
Gene3D G3DSA:3.30.1370.10 no description 4.2e-10 63-146
219-289
303-378
466-535
HMMPanther PTHR10288 KH 1.4e-83 1-416
HMMPanther PTHR10288:SF53 KH 1.4e-83 1-416
Seg seg seg NA 42-77
147-158
superfamily SSF54791 Eukaryotic 7.1e-08 55-149
454-542
292-391
209-272
Wolf-PSORT
Lj1g3v0986640.1	cyto 9, nucl 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0986640.1