Miyakogusa Predicted Gene

Lj1g3v0984180.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7J6V7_MEDTR 684 74.8 82.4 (tr|G7J6V7) Pectinesterase OS=Medicago truncatula GN=MTR_3g091380 PE=3 SV=1
TAIR_pep AT5G53370.1 605 65.2 76.0 | Symbols: ATPMEPCRF, PMEPCRF | pectin methylesterase PCR fragment F | chr5:21649683-21651530 REVERSE LENGTH=587
Medicago Medtr3g091380.1 684 74.8 82.4 | pectinesterase/pectinesterase inhibitor | HC | chr3:41569960-41574355 | 20130731
Soybean Glyma04g41460.1 686 76.2 82.7  
LJGI gnl|LJGI|TC79941 1538 98.5 98.5 similar to UniRef100_A0ZNJ9 Cluster: Pectin methylesterase 1; n=1; Pyrus communis|Rep: Pectin methylesterase 1 - Pyrus communis (Pear), partial (40%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0984180.1 length: 494 aa.
IPR000070 Pectinesterase, catalytic
method AccNumber shortName E-value location
Cellular Component GO:0005618 cell wall    
Molecular Function GO:0030599 pectinesterase activity    
Biological Process GO:0042545 cell wall modification    
HMMPfam PF01095 Pectinesterase 1.1e-109 267-494
IPR006501 Pectinesterase inhibitor
Molecular Function GO:0004857 enzyme inhibitor activity    
Molecular Function GO:0030599 pectinesterase activity    
Gene3D G3DSA:1.20.140.40 no description 7.5e-42 75-220
HMMPfam PF04043 PMEI 5.4e-36 74-219
HMMSmart SM00856 Plant 3.5e-42 73-219
HMMTigr TIGR01614 PME_inhib: 4.4e-38 48-220
superfamily SSF101148 Plant 2.5e-33 75-221
IPR011050 Pectin lyase fold/virulence factor
superfamily SSF51126 Pectin 2.1e-76 260-494
IPR012334 Pectin lyase fold
Gene3D G3DSA:2.160.20.10 no description 2.2e-84 263-494
IPR018040 Pectinesterase, active site
PatternScan PS00503 PECTINESTERASE_2 NA 413-422
no_ID  
HMMPanther PTHR31707 FAMILY 2.5e-202 20-494
HMMPanther PTHR31707:SF0 SUBFAMILY 2.5e-202 20-494
Seg seg seg NA 4-18
25-55
156-171
348-357
Putative transmembrane regions
  From To
TM segments
SOSUI		 37 59
Wolf-PSORT
Lj1g3v0984180.1	nucl 4, cyto 4, cyto_nucl 4, E.R. 2.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0984180.1