Miyakogusa Predicted Gene
- Lj1g3v0969940.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7IFI7_MEDTR |
100 |
82.5 |
91.2 |
(tr|G7IFI7) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_2g015010 PE=3 SV=1 |
| TAIR_pep |
AT2G36230.1 |
91.3 |
76.4 |
89.1 |
| Symbols: APG10, HISN3 | Aldolase-type TIM barrel family protein | chr2:15193878-15195509 REVERSE LENGTH=304 |
| Medicago |
Medtr2g015010.1 |
100 |
82.5 |
91.2 |
| aldolase-type TIM barrel family protein | HC | chr2:4408457-4401664 | 20130731 |
| Soybean |
Glyma02g06120.1 |
98.6 |
81.0 |
91.4 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v0969940.1 |
length: 67 aa. |
| IPR011858 |
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, eukaryotic |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0000105 |
histidine biosynthetic process |
|
|
| Molecular Function |
GO:0003949 |
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity |
|
|
| HMMPanther |
PTHR21169 |
1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] |
1.4e-20 |
8-66 |
| IPR013785 |
Aldolase-type TIM barrel |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Gene3D |
G3DSA:3.20.20.70 |
no description |
6.2e-06 |
5-62 |
| no_ID |
|
| HMMPanther |
PTHR21169:SF0 |
SUBFAMILY |
1.4e-20 |
8-66 |
- Wolf-PSORT
Lj1g3v0969940.1 cyto 8, extr 3, chlo 1, vacu 1, pero 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v0969940.1 |
|