Miyakogusa Predicted Gene
- Lj1g3v0958830.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7J7E9_MEDTR |
275 |
84.4 |
89.6 |
(tr|G7J7E9) Soluble starch synthase OS=Medicago truncatula GN=MTR_3g091570 PE=3 SV=1 |
| TAIR_pep |
AT5G24300.2 |
228 |
75.5 |
84.4 |
| Symbols: SSI1 | Glycogen/starch synthases, ADP-glucose type | chr5:8266934-8270860 FORWARD LENGTH=652 |
| Medicago |
Medtr3g091570.1 |
275 |
84.4 |
89.6 |
| starch synthase 2/amyloplastic protein | HC | chr3:41674619-41682385 | 20130731 |
| Soybean |
Glyma04g41370.1 |
267 |
82.6 |
88.6 |
|
| LJGI |
gnl|LJGI|TC69659 |
666 |
97.8 |
97.8 |
similar to UniRef100_Q75T80 Cluster: Starch synthase I precursor; n=1; Phaseolus vulgaris|Rep: Starch synthase I precursor - Phaseolus vulgaris (Kidney bean) (French bean), partial (22%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v0958830.1 |
length: 149 aa. |
| IPR001296 |
Glycosyl transferase, family 1 |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0009058 |
biosynthetic process |
|
|
| HMMPfam |
PF00534 |
Glycos_transf_1 |
5.4e-10 |
2-124 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.50.2000 |
no description |
6.5e-50 |
2-143 |
| HMMPanther |
PTHR12526 |
GLYCOSYLTRANSFERASE |
2.7e-55 |
1-147 |
| HMMPanther |
PTHR12526:SF17 |
STARCH |
2.7e-55 |
1-147 |
| superfamily |
SSF53756 |
UDP-Glycosyltransferase/glycogen |
8e-35 |
3-147 |
- Wolf-PSORT
Lj1g3v0958830.1 nucl 5, cyto 4, chlo 3, extr 2, cyto_pero 2, cyto_E.R. 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v0958830.1 |
|